MU Secretariat of Study Centers was established in 2019 to develop consistency in executive functioning of the four study centers. Accordingly, all functions of the Study Centers of Human Rights, the Qur'an, Economics and Comparative Law, such as holding national and international conferences, seminars, meetings, scientific conferences, promotional chairs, etc. are carried out by this secretariat; The secretariat is also responsible for management and preparation of MU’s scientific periodicals until their publication.

Centralized management, synergy of executive power and consistent growth in quality of various functions of Study Centers and scientific periodicals of the university are some of the primary goals of this secretariat. Therefore, in addition to having its own expert, the Secretariat is run by cooperation of all to use the maximum competency and productivity of individuals to achieve optimal progress.